BIODIVERSITY RESEARCH GROUP
Welcome to our lab, this is a multidisciplinary lab group with projects studying the ecology of marine, freshwater and terrestrial ecosystems, combining a mixture of theoretical and empirical approaches. All of our study systems are within easy access of Cork City.
The Biodiversity Research Group (BRG) is based at UCCs Environmental Research Institute (ERI), where we have our labs and offices. Although we are based within the ERI all members of the research group contribute to the teaching and research that takes place within the Department of Zoology, Ecology and Plant Sciences (ZEPS) at UCC.
| Mark
is a community-ecosystem ecologist using a mixture of empirical and theoretical
approaches to broadly study the effects of biodiversity change on ecosystem
functioning in natural systems. He has a background in marine ecology,
but since being appointed in the Department of Zoology, Ecology and Plant
Sciences at UCC, Mark has initiated projects in a range of systems including
terrestrial (e.g. Gearagh,
BioUP and AGRIPOPES) freshwater (e.g. Natterjack
Ponds) and marine (e.g. Lough
Hyne). The main goal of Marks research is to establish a series
of well studied field sites easily accessible from Cork, where ecological
ideas can be tested and explored experimentally. This requires an understanding
of how different species interact with one another and one of the central
themes of Mark's work has been how body size affects the strength of trophic
interactions in 'real' food webs. With this information in place it should
be possible to simulate food web dynamics and then predict the consequences
of biodiversity change in natural systems. These predictions could then
be tested experimentally. Marks interests are diverse and if you would
like to learn more please follow the link to his home page.
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My research group is relatively new to Cork and is still building up, although we are part of the Department of Zoology, Ecology and Plant Sciences at UCC, the biodiversity research group is located at the new Environmental Research Institute next to the river Lee to the west of Cork City.
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Postgraduate or Postdoctoral opportunities
If you are interested in a PhD or Postdoctoral research opportunities at UCC then please contact me, there are a range of funding mechanisms including the Embark Scheme, EPA and adhoc opportunities always arise. To get a feel for some of the projects we have currently running take a look at the folk below, they are the ones that make things happen!
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Freshwater
Ecology
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Aurélie is a PhD student studying the conservation ecology of the natterjack toad (Bufo calamita) at a number of sites in Co. Kerry South West Ireland. The project is attempting to place the toads in an ecosystem context - what does that mean? The main aim of Aurélie's study is to investigate how toad populations are influenced by their biotic (predation) and abiotic (habitat complexity) environments. Among the Kerry populations a gradient of habitat complexity has been established from sites where there are many ponds with interlinking drains to sites with single isolated ponds. The aim is to determine whether this gradient of environmental complexity (in a landscape context) can explain the survival of toads from eggs through to toadlets. Aurelie is also investigating to what extent the survival of the toad tadpoles is determined by the predator burden of ponds that are constructed through conservation efforts. Another major aim is to determine whether the some of the kerry sites function as metapopulations and how do the toads contribute to the functioning of the sand dune systems of which they are a part. e-mail: aurelieaubry@yahoo.fr |
| Emeline
is a Masters student studying the effects of habitat quality on the
survivorship of natterjack toads (Bufo calamita) in south west
Co. Kerry. Emeline's project is being carried out in collaboration with
the National Parks and Wildlife Service here in Ireland. The aim of
Emelines project is to identify a range of metrics, which express a
measure of habitat quality, for instance primary and secondary production
and to see how this is related to the survival of toad tadpoles from
ponds. Emeline is also investigating how the flora and fauna surrounding
the ponds might influence adult toad survival and condition.
e-mail: enole_b@hotmail.com |
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Terrestrial
Ecology
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Órla McLaughlin is currently working towards her PhD at University College Cork, Ireland. Her PhD is concerned with the food web structure of terrestrial invertebrate communities and how biodiversity change affects the temporal dynamics of food web structure and ecosystem functioning (primary productivity and decomposition). A combination of both empirical and theoretical approaches is being used to explore food web dynamics and the consequences of species loss. Órla's fieldwork is being carried out in the Gearagh, near Macroom, County Cork, Ireland (51052'N 009001'W). She is manipulating the food web structure of small replicate islands within this riverine system and exploring the effects on ecosystem functioning. The Gearagh is a mixed deciduous alluvial woodland in the floodplain of the River Lee. It is one of the last semi-natural forested floodplains in Europe and is unique in Ireland. e-mail: o.mclaughlin@mars.ucc.ie |
BioUP (Biodiversity change in the Kerry UPlands) - Ros Anderson and Nadine Kramm
Ros Anderson
| Roz
is a PhD student funded by the Science Foundation Ireland to study BIOdiversity
Change in the Irish UPlands (BIOUP). Changes in land management practices
in recent years, from overgrazing to undergrazing are closely linked to
the biodiversity status of these areas. The aim of this project is to
monitor, evaluate and model biodiversity change in the uplands of County
Kerry. This will involve extensive vegetation and invertebrate sampling,
as well as bird surveys. The project will also make extensive use of mathematical
approaches to model the consequences of alternative abandonment scenarios.
This information will then be used, along with socio-economic data (collected
by a joint PhD Nadine Kramm) to develop a model to predict the biodiversity
status of priority upland habitats and species under different land management
scenarios. This is a unique project as it integrates ecological and socio-economic
data, as well as stakeholder participation, making it relevant and valuable
to the people as well as the biodiversity of Ireland.
Roz's background is mainly in population ecology. She completed her BSc (Hons) in Zoology at the University of Glasgow and her MSc in Ecology at the University of Aberdeen. Since then she has worked on the dynamics of infectious diseases in wild rodent populations in Kielder Forest and feral goat maternal time budgets on the Isle of Rum, both with the University of Liverpool. As part of the Soay Sheep Project rut behaviour and vegetation analysis were undertaken on St Kilda, while work at the Macaulay Institute included observing social and foraging behaviour, diet choice and composition in domestic sheep and goats, red deer habitat use and aspects of alpine willow conservation. An interest in marine biology was also gained through her work on deep water coral behaviour and brittlestar growth at Dunstaffnage Marine Laboratory. Roz hopes this wide range of expertise will provide a good basis for her PhD and may help formulate some interesting questions over the next three years. Roz is supervised by Dr. Mark Emmerson and Prof. John O'Halloran. |
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Nadine Kramm
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Nadine is a PhD student with a background in environmental policy and ecological economics. Her research is part of a Science Foundation Ireland funded project examining biodiversity change in the Irish uplands under different management scenarios. Nadine has a strong interest in human-environment interactions and inter-disciplinary research. She will work on the socio-economic factors driving biodiversity change in the Kerry uplands including land use change, farm management systems and the policy environment. Her aim is to illicit local stakeholders' understanding of biodiversity and to develop acceptable stakeholder future scenarios for reconciling rural development, agriculture, recreation and biodiversity in the uplands. Nadine is supervised by Dr. Eileen O'Rourke. |
AGRIPOPES - Catherine Palmer and Chris Dennis
Catherine Palmer
| Catherine is a PhD student whose studies are part of the European wide AGRIcultural POlicy-Induced landscaPe changes (AGRIPOPES) project. Amongst other objectives, the aim of the AGRIPOPES project is to examine the effects of agricultural intensification on biodiversity. Catherine completed an MSc by research in Mathematics at UCC and hopes to apply mathematical approaches to model biocontrol foodweb dynamics. She aims to model the way in which indirect effects (caused by agricultural intensification) spread throughout biocontrol food webs and to develop models to explore how the effects of natural enemy diversity affect the magnitude of trophic cascades. Catherine is co-supervised with Alexei Pokrovskii in Applied Mathematics. |
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Chris Dennis
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Chris started
his PhD in 2006 at University College Cork. He has joined the group
from Sheffield University where he studied for a degree in Ecology.
His PhD is part of the AGRIPOPES project a large-scale pan-European
study involving 10 countries that will examine the effect of agricultural
intensification on biodiversity. Working alongside Catherine Palmer,
Chris will be investigating the ecosystem services provided by biodiversity.The
project will examine the extent to which biocontrol food webs are simplified
by agricultural intensification and which predator species are most
important for the control of agricultural pests, specifically aphids.
The focus of Chris's fieldwork will be in south east Ireland and will
involve quantifying weeds, predators and biological control potential
over 30 farms distributed along a gradient of agricultural intensification.
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Marine
Ecology
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Eoin O'Gorman
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Eoin graduated from UCC in 2004 with a degree in Zoology. After spending a year out, he was recently awarded funding by the Irish Research Council for Science Engineering and Technology, to do a PhD focusing on the ecology of Lough Hyne. The aim of his PhD is to investigate the role of intermediate predators for food web dynamics and ecosystem functioning at the Lough. Selected species include a range of gobies, e.g. Black Goby (Gobius niger), Rock Goby (Gobius paganellus), and Two Spot Goby (Gobiusculus flavescens), small wrasse such as the Gold Sinny (Ctenolabrus rupestris), Corkwing Wrasse (Crenilabrus melops) and Ballan Wrasse (Labrus bergylta) and the highly abundant common prawn, Palaemon serratus. A major component of the study will involve subtidal caging experiments to determine the indirect effects of these species on primary productivity and decomposition, both individually and using different combinations of species (diversity effects on ecosystem functioning). Such effects are likely to be mediated through predatory effects on important functional groups such as decomposers and herbivores. He also hopes to carry out longer term studies using enclosed benthic communities, examining the effects of intermediate predators on the process of community assembly. These communities once assembled will be perturbed by removing predators from different parts of the resulting food webs. The effects of such perturbations will be predicted using a mixture of theoretical approaches. e-mail: e.ogorman@mars.ucc.ie |
Nessa O'Connor
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Nessa was recently awarded an IRCSET postdoctoral fellowship and will join the Biodiversity Research group in January 2006. Nessa is a graduate of Trinity College and completed her MSc (Agr) at UCD. After a couple of years as a research assistant she returned to UCD and completed her PhD in 2004, under the supervision of Tas Crowe and with advice from Dave McGrath of GMIT. Her research focuses on the relationships between biodiversity, ecosystem functioning and habitat structure. She spent 2005 working with John Bruno's team at the University of North Carolina at Chapel Hill, where her work focused on characterising the effects of loss of predator biodiversity on grazer and algal assemblages. She is also collaborating with Jonathon Grabowski (Gulf of Maine Research Institute) examining effects of the loss of harvested predatory crabs on oyster populations. At UCC, Nessa
will continue to test models based on biodiversity and ecosystem functioning.
In particular, she will address the effects of loss of diversity at
multiple trophic levels. This will include a series of factorial manipulations
of predator identity and diversity in the field. These experiments will
test for independent and interactive effects of loss of species on community
structure, primary and secondary production and nutrient cycling in
mussel dominated intertidal assemblages. e-mail: n.oconnor@ucc.ie |
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Tom Doyle
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Tom works on turtles and jellyfish. He is in the final year of his PhD under the supervision of Prof. John Davenport (ZEPS, UCC) and Prof. Graham Hayes (Department of Biological Sciences, University of Swansea) funded under INTERREG. Tom's work involves chasing down turtles around the Irish coastline and mapping the distribution of their main food source - Jellyfish. The aim of Tom's study is to understand what determines the distribution of turtles in Irish coastal waters. This is achieved using a mixture of boat and arial surveys, along with satellite tagging of turtles.
e-mail: t.doyle@ucc.ie |
Marion Twomey
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Marion graduated from UCC with a degree in Zoology, followed by an M.Sc. in Environmental Management at the University of Ulster. Having worked as a project scientist preparing EIAs for a couple of years, she decided to return to UCC to study field ecology. She was recently awarded funding by the Irish Research Council for Science, Engineering and Technology to undertake a PhD looking at the consequences of biodiversity change in a marine food web at Lough Hyne, Co.Cork. The project will use a mixture of field-based approaches to document patterns of body size, abundance, food web structure (trivariate patterns) and metabolic rates of species from the lough. By perturbing the real food web through large-scale species removal experiments, we will also investigate how the loss of three important consumer species; the purple sea urchin, Paracentrotus lividus, the spiny sea star, Marthesterias glacialis and the velvet swimming crab, Necora puber, would affect the stability and the ecosystem functioning of the Lough Hyne food web. |
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Matthew Castle
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Matt graduated from Cambridge with a degree in Mathematics in 2002. After some time travelling in New Zealand he has most recently completed a taught MSc entitled 'Maths In the Living Environment' at the University of York. Matt's work will investigate predator species impacts in food webs using a mixture of linear and non-linear modelling approaches. The aim of Matt's project will be to try and predict (from the biological species specific traits, e.g. body size, linkage density or metabolic rate) the impact that the removal of a given predator will have on ecosystem functioning and processes, for example, primary productivity, secondary production and ecosystem resilience. |
More folk from within the Department of Zoology, Ecology and Plant Sciences during a postgraduate away day at Lough Hyne

Background: Mark Jessopp and John O'Driscoll; from Left to right: Orla Mclaughlin, Aurelie Aubry, Emeline Becart, Richard O'Callaghan, Niamh Kilgallen, Geroid Webb and Mark Emmerson; foreground: Jane Kavenagh.